BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038B01LP1|AL430481
(936 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig678 1260 0.0
>3x_Contig678
Length = 1675
Score = 1260 bits (617), Expect = 0.0
Identities = 816/908 (89%)
Strand = Plus / Plus
Query: 29 aaagcctcggcggcagcggaaaaaacacgggaccggaaatgattctttatgaagcgagaa 88
||||||||| || |||| || | |||||| |||| ||||| ||||||||| |||| ||||
Sbjct: 322 aaagcctcgtcgtcagctgatataacacgtgacctgaaattattctttattaagctagaa 381
Query: 89 agtgcactggatggacatakakagakgcgggakkkgaatatgcatgcgagadggggkggg 148
||| ||||| ||| ||||| | ||| || ||| |||||| ||||| ||| | || ||
Sbjct: 382 agttcactgtatgtacatatatagatgctggatttgaatattcatgctagatgtggtggt 441
Query: 149 agaaggagggkgggaakgckgtggkkkatggaggakakgkgtgcacagkkktkgcattgc 208
||||||||| |||| || || ||| || | | | || ||||| | |||||||
Sbjct: 442 agaaggaggtttggaatgctgttttttatgtagtatatgtgttcacagtttttgcattgc 501
Query: 209 attggkccctckacaatgtgagkktgaatkaacagtgtgtgcagakckcttagaatgacc 268
||| | ||||| ||||||| || ||||| ||||||||||||||| | ||||||||||||
Sbjct: 502 atttgtccctctacaatgttagtttgaattaacagtgtgtgcagatctcttagaatgacc 561
Query: 269 atgkcctcatccgtgaaadrctctkcaaadrcggggttgtkgggggggagcgcaggattt 328
||| |||||||||| ||| |||| |||| | || |||| ||| || ||| ||| ||||
Sbjct: 562 atgtcctcatccgttaaattctcttcaaattctggtttgttgggtggtagctcagtattt 621
Query: 329 cckaaadckgaggcgacggaaacgacagcgtgccaatcaacacgggcaatgatgcggaaa 388
|| ||| | || || || ||||| ||||| ||||||||||||||| |||| || | |||
Sbjct: 622 cctaaatctgatgctactgaaactacagcttgccaatcaacacggtcaattattcttaaa 681
Query: 389 aggaacgccggggtgaattcgatgctctcatcctggtckagttgacaatgttcacgaacg 448
|||||| ||||| |||||||||||||||||||||| || |||||||||| ||||||||||
Sbjct: 682 aggaactccgggttgaattcgatgctctcatcctgttctagttgacaattttcacgaacg 741
Query: 449 tagcgaagtgngaaartcaggttactgtgatcgcatcckttcacggaacatttaaggaag 508
|||||||||| |||| |||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 742 tagcgaagtgggaaattcaggttactgttatcgcatcctttcacggaacatttaaggaag 801
Query: 509 tgtgtagttaggaatttcatatctgcagttagtttaatgggtcgggtataattcgattca 568
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 tttgtagttaggaatttcatatctgcagttagtttaatgggtcgggtataattcgattca 861
Query: 569 caataacaaaatgatgctgattttattgggactcacttcatctcatcgcattaacaactc 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 caataacaaaatgatgctgattttattgggactcacttcatctcatcgcattaacaactc 921
Query: 629 tgttcgaattcattgataattcgatttttacggtttttaatttttcatgttacagaaatg 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 922 tgttcgaattcattgataattcgatttttacggtttttaatttttcatgttacagaaatg 981
Query: 689 aaaagaaaagattcccatgccagaaagaagcagggtatgcatatgaagaacaatatgtaa 748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 982 aaaagaaaagattcccatgccagaaagaagcagggtatgcatatgaagaacaatatgtaa 1041
Query: 749 gtattataatcttcaatatctgattcattcctacctaacgttaacactccaaaaattaaa 808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1042 gtattataatcttcaatatctgattcattcctacctaacgttaacactccaaaaattaaa 1101
Query: 809 tcaatcttgaggcagacaagcatgctaatcgtttcacagacatttttttaaatttttttt 868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1102 tcaatcttgaggcagacaagcatgctaatcgtttcacagacatttttttaaatttttttt 1161
Query: 869 attttctttgttgagattattcttgtagatattatcctgtcacattgagcatatgaatca 928
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1162 attttctttgttgagattattcttgtagatattatcctgtcacattgagcatatgaatca 1221
Query: 929 aagctact 936
||||||||
Sbjct: 1222 aagctact 1229
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.42 0.717 1.34
Gapped
Lambda K H
1.42 0.717 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6498
Number of Sequences: 1807
Number of extensions: 6498
Number of successful extensions: 267
Number of sequences better than 1.0e-20: 1
length of query: 936
length of database: 10,358,551
effective HSP length: 16
effective length of query: 920
effective length of database: 10,329,639
effective search space: 9503267880
effective search space used: 9503267880
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.6 bits)
S1: 12 (25.0 bits)
S2: 49 (100.6 bits)